Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910719.1_cds_XP_016460732.1_54121
CDS Infomation

[gene=LOC107784165] [db_xref=GeneID:107784165] [protein=3-ketoacyl-CoA synthase 4 isoform X3] [protein_id=XP_016460732.1] [location=complement(join(24773..25366,25409..26374))] [gbkey=CDS]
Sequence

ATGGACGGAGGCGCCGGCGCTCAAGTCAACACCGCCCGTGGCGGCGCTGAACCAGTCGGA
GTTCAGATCCAGCAGAGTCGGAGGTTGCCGGATTTCCTTCAGAGTGTAAACTTGAAGTAC
GTTAAATTAGGTTACCATTACTTGATCTCTAATTTATTGACTCTTTGTTTGATTCCTGTA
ATGGCTGTGATTTTAATTGAAGCTTCACAAATGAATCCTGATGATATTCGTCACTTATGG
CTACATTTGAAGTATAATCTAGTCTCTGTTATTATTTGTTCGGCGGTTTTAGTTTTCGGA
TCCACGGTTTACATCATGACCCGGCCGCGCCCGGTTTATTTGGTTGATTACTCTTGTTAT
AAAGCTCCTGATGAACTCAAGGCTCCTTATGAACGGTTCATGCAGCACTCGCGGCTCACC
GGTGATTTCGATGAGTCTTCGCTTGAGTTTCAGCGGAAGATTCTAGAACGTTCTGGCCTC
GGAGACGAGACCTATGTTCCCGAGGCCATGCATCATCTTCCCCCGCAGCCTTCTATGCAG
GCTGCCAGGGGAGAAGCTGAGCAAGTTATGTTTGGTGCACTGGATAATTTGTTTGCTAAT
ACCTCTGTGAAGCCTAAGGATATAGGTGTACTTGTTGTAAATTGTAGTTTGTTCAATCCG
ACGCCATCGCTTTCGGCTATGATTGTGAACAAGTATAAGTTGAGAGGTAATATAAGGAGT
TTTAACCTGGGAGGTATGGGTTGTAGTGCTGGTGTGATTGCGGTTGATCTTGCTAAGGAC
ATGTTGCAAGTGCACAGGAATACCTATGCTGTTGTTGTTAGTACTGAGAATATTACTCAG
AATTGGTATTTTGGGAATAAGAAGTCCATGTTGATACCAAATTGTTTGTTTAGAGTCGGG
GGTGCAGCTGTTCTGCTGTCTAACAAGTCTGTGGATAGAAGAAGGGCAAAATATAAGCTT
GTTCATCTTGTTCATGTTGTTAGGACACATCGTGGGGCTGATGATAAGGCGTTTCGTTGT
GTTTACCAAGAACAGGATGATGCTGGGAAAACTGGGGTATCTTTATCGAAAGATCTCATG
GCAATCGCTGGTGGAGCACTTAAGACGAATATCACTACCTTGGGTCCTCTTGTTCTACCC
ATCAGCGAGCAGCTTCTGTTCTTTGCTACTCTGATAATAAAGAAAATATGCAATAAGCAT
GTGAAGCCTTATATTCCAGATTTCAAGTTGGCCTTTGATCATTTCTGCATACATGCTGGT
GGAAGAGCCGTTATTGACGAGCTGGAAAAGAATTTGCAGCTGACGCAGGTTCATGTTGAG
GCATCTCGAATGACACTGCACCGCTTTGGAAATACTTCGTCCAGCTCCATCTGGTATGAA
CTGGCGTATACAGAGGCCAAAGGAAGAATGCGGAAAGGTAACAAAGTTTGGCAGATAGCA
TTTGGAAGTGGTTTTAAATGTAATAGTGCTGTTTGGCAGGCACTGCGAAATGTAAAGCCT
TCTCAAAATGGTCCCTGGGAAGATTGTATTGACAGGTATCCTGTAAAAGTAGTCTCATAA

Peptide Sequence

PEP ID

XP_016460732.1
PEP Infomation

PREDICTED: 3-ketoacyl-CoA synthase 4 isoform X3 [Nicotiana tabacum]
Sequence

MDGGAGAQVNTARGGAEPVGVQIQQSRRLPDFLQSVNLKYVKLGYHYLISNLLTLCLIPV
MAVILIEASQMNPDDIRHLWLHLKYNLVSVIICSAVLVFGSTVYIMTRPRPVYLVDYSCY
KAPDELKAPYERFMQHSRLTGDFDESSLEFQRKILERSGLGDETYVPEAMHHLPPQPSMQ
AARGEAEQVMFGALDNLFANTSVKPKDIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNIRS
FNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVG
GAAVLLSNKSVDRRRAKYKLVHLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLM
AIAGGALKTNITTLGPLVLPISEQLLFFATLIIKKICNKHVKPYIPDFKLAFDHFCIHAG
GRAVIDELEKNLQLTQVHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNKVWQIA
FGSGFKCNSAVWQALRNVKPSQNGPWEDCIDRYPVKVVS

Transcript Sequence

Gene sequence data has not been registered.